Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1453

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326244 to 328401 9820 mRNA_1453: 9821 - HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443, at 328591 to 330027 9821 mRNA_1454: 9822 - K11390 CLYBL citrate lyase subunit beta-like protein, at 330186 to 331593 9822

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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328,324 - 0.5
328,516 + 0.5
328,803 + 9821 mRNA_1453 0.15 -0.8
328,811 + 9821 mRNA_1453 0.15 -0.3
328,812 - 9821 mRNA_1453 0.15 0.3
329,236 + 9821 mRNA_1453 0.45 1.4
329,558 - 9821 mRNA_1453 0.67 -0.5
329,681 - 9821 mRNA_1453 0.76 -0.2
330,128 - -0.6
330,251 - 0.2
330,255 + -0.6
330,263 - -1.1
330,268 + 0.5
330,275 + -2.5
330,707 + 9822 mRNA_1454 0.37 0.0