Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1438

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1438: 9806 - Hypothetical Protein, at 280347 to 281494 9806 mRNA_1439: 9807 - K03544 clpX, CLPX ATP-dependent Clp protease ATP-binding subunit ClpX, at 281812 to 284553 9807

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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279,427 - 2.4
279,457 + -0.3
279,607 + 0.4
279,617 + 1.0
279,763 + 0.1
279,768 + 0.4
280,325 - 1.4
280,611 - 9806 mRNA_1438 0.23 -1.6
280,700 - 9806 mRNA_1438 0.31 0.1
280,901 + 9806 mRNA_1438 0.48 -1.6
280,917 + 9806 mRNA_1438 0.50 0.4
281,024 - 9806 mRNA_1438 0.59 -0.8
281,048 - 9806 mRNA_1438 0.61 0.6
281,084 + 9806 mRNA_1438 0.64 0.6
281,231 + 9806 mRNA_1438 0.77 -0.3
281,357 + 9806 mRNA_1438 0.88 1.3
281,363 - 9806 mRNA_1438 0.89 1.9
281,371 + 9806 mRNA_1438 0.89 -1.4
281,619 - -1.1
281,629 - -1.2
281,739 - 1.1
281,753 - 0.1
281,756 + -0.4
281,757 + -0.1
281,888 - -0.2
281,941 - 0.3
281,944 + -0.0
282,052 - 0.7
282,195 - 9807 mRNA_1439 0.14 0.3