Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1431

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1430: 9798 - KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1, at 264327 to 265821 9798 mRNA_1431: 9799 - Hypothetical Protein, at 266080 to 266508 9799 mRNA_1432: 9800 - K01653 E2.2.1.6S, ilvH, ilvN acetolactate synthase I/III small subunit, at 267491 to 268796 9800

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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265,406 - 9798 mRNA_1430 0.72 -0.0
265,563 - 9798 mRNA_1430 0.83 -0.9
265,684 - -1.4
265,722 - -1.9
265,847 - 2.2
265,876 + -0.0
265,889 - -0.4
265,890 - 0.2
265,894 + -0.9
265,914 + -0.7
266,018 - -2.1
266,036 - -0.5
266,188 + 9799 mRNA_1431 0.25 -0.6
266,188 + 9799 mRNA_1431 0.25 -0.1
266,339 - 9799 mRNA_1431 0.60 1.0
266,463 - 9799 mRNA_1431 0.89 0.6
266,464 + 9799 mRNA_1431 0.90 0.5
266,471 - -1.0
266,501 - 0.2
266,506 + -0.8
266,616 + -0.1
266,621 + 0.1
266,634 + -0.9
266,693 - -0.2
266,759 - -0.0
266,760 - 0.5
266,913 - -0.0
266,919 + -0.0
266,927 - -0.0
266,936 - -0.4
267,050 - -0.1
267,052 - -0.6
267,065 + -0.0
267,091 + 0.3
267,091 + 0.9
267,095 + 0.0
267,095 + 1.2
267,103 + 0.6
267,116 + -1.5
267,241 + -0.2
267,251 + -0.2
267,264 + 0.5
267,267 + -0.1
267,274 - -0.2
267,281 + 1.0
267,282 + 0.4
267,388 - -0.5