Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1412

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1411: 9779 - Hypothetical Protein, at 205641 to 206403 9779 mRNA_1412: 9780 - K11699 RDR, RDRP RNA-dependent RNA polymerase, at 206910 to 211871 9780

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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205,911 - 9779 mRNA_1411 0.35 0.5
206,008 - 9779 mRNA_1411 0.48 -1.4
206,220 + 9779 mRNA_1411 0.76 1.0
206,326 - 9779 mRNA_1411 0.90 -0.2
206,327 - 0.8
206,353 + 1.8
206,458 - -0.3
206,471 + 1.4
206,608 - -0.4
206,633 + 2.3
206,803 - -0.7
206,968 + -0.2
207,082 - 0.3
207,516 + 9780 mRNA_1412 0.12 -1.0
207,546 - 9780 mRNA_1412 0.13 -0.8
207,549 + 9780 mRNA_1412 0.13 -1.2
207,647 - 9780 mRNA_1412 0.15 0.1
207,843 - 9780 mRNA_1412 0.19 -1.9
207,965 + 9780 mRNA_1412 0.21 -1.0
207,973 - 9780 mRNA_1412 0.21 -0.2
207,987 + 9780 mRNA_1412 0.22 1.0
208,099 - 9780 mRNA_1412 0.24 0.6
208,114 + 9780 mRNA_1412 0.24 1.4
208,228 - 9780 mRNA_1412 0.27 0.0
208,562 + 9780 mRNA_1412 0.33 -1.1
208,668 + 9780 mRNA_1412 0.35 -0.5
208,688 + 9780 mRNA_1412 0.36 0.1
209,033 + 9780 mRNA_1412 0.43 2.5
209,285 + 9780 mRNA_1412 0.48 -1.4
209,321 - 9780 mRNA_1412 0.49 0.1
209,392 - 9780 mRNA_1412 0.50 -1.1
209,400 + 9780 mRNA_1412 0.50 0.5
209,599 + 9780 mRNA_1412 0.54 -1.0
209,713 + 9780 mRNA_1412 0.56 0.6
209,762 + 9780 mRNA_1412 0.57 0.4
210,139 + 9780 mRNA_1412 0.65 0.2
210,892 - 9780 mRNA_1412 0.80 0.0
211,423 - -0.6
211,427 + -0.5
211,814 + -0.6
212,142 + 1.0
212,226 - 0.6
212,228 - 0.2
212,369 - 0.3
212,543 + 0.3
212,702 - 0.9
212,811 - 0.4