Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1388

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1387: 9755 - BLAST bromodomain-containing protein 8 [Cryptococcus ne..., at 148746 to 149519 9755 mRNA_1388: 9756 - K00698 CHS1 chitin synthase, at 150149 to 154291 9756

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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149,278 - 9755 mRNA_1387 0.69 0.5
149,404 - 9755 mRNA_1387 0.85 -0.2
149,417 + 9755 mRNA_1387 0.87 0.9
149,719 + -0.1
149,727 - 1.4
149,739 - 0.2
149,990 + 2.3
150,006 + 0.5
150,097 - -0.0
150,279 + -0.1
150,566 - 9756 mRNA_1388 0.10 0.3
150,777 + 9756 mRNA_1388 0.15 0.3
151,319 - 9756 mRNA_1388 0.28 0.1
151,568 + 9756 mRNA_1388 0.34 0.9
151,593 + 9756 mRNA_1388 0.35 0.8
151,881 - 9756 mRNA_1388 0.42 -0.0
152,049 + 9756 mRNA_1388 0.46 0.1
152,182 + 9756 mRNA_1388 0.49 0.4
152,188 + 9756 mRNA_1388 0.49 -0.3
152,606 - 9756 mRNA_1388 0.59 -0.9
152,715 + 9756 mRNA_1388 0.62 -0.4
152,773 - 9756 mRNA_1388 0.63 0.2
152,865 + 9756 mRNA_1388 0.66 -0.4
153,326 + 9756 mRNA_1388 0.77 0.2
153,917 + 0.2
154,059 - -0.6
154,182 + -1.5
154,755 - 0.9
154,788 + 2.0
154,918 - 0.3
155,056 + -1.6
155,060 + -3.4
155,069 - 2.3
155,091 - -0.8
155,127 + 0.1
155,216 + -2.2
155,226 + 0.0
155,231 - 2.6
155,239 + 0.3
155,249 + 1.0