Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1384

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1383: 9751 - HMMPfam-Nse4 C-terminal-PF08743,HMMPfam-Binding domain of Nse4/EID3 to Nse3-MAGE-PF15412, at 142015 to 143615 9751 mRNA_1384: 9752 - KOG4472 Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase), at 143801 to 145438 9752 mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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144,137 + 9752 mRNA_1384 0.21 0.4
144,145 + 9752 mRNA_1384 0.21 0.1
144,283 + 9752 mRNA_1384 0.29 1.9
144,427 + 9752 mRNA_1384 0.38 1.4
144,491 - 9752 mRNA_1384 0.42 1.5
144,730 - 9752 mRNA_1384 0.57 2.5
144,877 + 9752 mRNA_1384 0.66 0.0
145,281 - 2.7
145,344 + -1.2
145,463 + 1.4
145,587 + 1.7
145,601 - 0.7
145,605 - 0.7
145,609 + 0.3
145,744 + -3.5
145,748 - 0.4
145,769 + 0.5
145,887 - 1.3
145,896 + -0.1
146,026 - 9753 mRNA_1385 0.13 0.6
146,077 - 9753 mRNA_1385 0.18 -0.4