Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1366

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1365: 9733 - K17260 ACTR2, ARP2 actin-related protein 2, at 103522 to 105237 9733 mRNA_1366: 9734 - K00661 maa maltose O-acetyltransferase, at 105397 to 106460 9734 mRNA_1367: 9735 - K03233 EEF1G elongation factor 1-gamma, at 106812 to 108790 9735

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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105,327 - 1.3
105,739 - 9734 mRNA_1366 0.32 0.8
106,049 + 9734 mRNA_1366 0.61 0.5
106,165 - 9734 mRNA_1366 0.72 0.5
106,178 + 9734 mRNA_1366 0.73 -1.2
106,579 - 0.5
106,598 + 0.6
106,603 + 0.9
106,605 + -1.2
106,608 - -0.8
106,609 - -1.0
106,612 + -0.4
106,615 - -0.2
106,645 + -0.8
106,653 - 0.1
106,673 + -0.5
106,676 - 1.1
106,817 + -2.0