Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1361

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728 mRNA_1361: 9729 - Hypothetical Protein, at 90771 to 91579 9729 mRNA_1362: 9730 - K00507 SCD, desC stearoyl-CoA desaturase (Delta-9 desaturase), at 92515 to 94818 9730

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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89,965 + 9728 mRNA_1360 0.87 -0.8
90,038 + -0.2
90,068 + 0.3
90,145 - -1.4
90,242 - -0.3
90,326 - -0.5
90,328 + -0.7
90,335 - 0.6
90,349 + 0.5
90,350 + -0.5
90,356 + 1.3
90,364 + -0.2
90,374 + -0.1
90,376 - 0.2
90,378 - 0.8
90,532 - 1.4
90,534 - 0.5
90,556 + -1.3
90,568 + -0.3
90,606 - 0.9
90,696 + -1.1
90,709 + 2.4
90,822 - -0.3
90,901 - 9729 mRNA_1361 0.16 0.0
91,118 - 9729 mRNA_1361 0.43 0.9
91,123 - 9729 mRNA_1361 0.44 -0.1
91,268 + 9729 mRNA_1361 0.61 -0.9
91,334 + 9729 mRNA_1361 0.70 -0.3
91,554 - -0.0
91,689 + -0.1
91,699 + 0.5
91,714 + -1.5
91,818 - -1.9
91,935 - -0.7
91,935 - 0.2
91,938 + -0.2
91,959 - 0.5
91,978 - -2.0
92,007 + -0.7
92,008 + -0.2
92,008 + 1.6
92,010 + -0.2
92,027 + -0.7
92,058 - -0.2
92,090 - -0.1
92,094 + -0.3
92,105 - 1.9
92,128 + 0.6
92,131 - 0.2
92,142 - -0.1
92,143 + -0.1
92,155 + -0.3
92,162 - 0.6
92,176 - -0.4
92,206 + 1.2
92,212 + 0.5
92,212 - -0.7
92,221 - 1.4
92,255 - -1.9
92,270 - 2.0
92,272 - -0.3
92,282 - -0.4
92,285 + -1.9
92,291 + 0.2
92,295 - 0.4
92,302 - 0.1
92,308 + -0.6