Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1346

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1345: 9713 - KOG2533 Permease of the major facilitator superfamily, at 47713 to 50221 9713 mRNA_1346: 9714 - Hypothetical Protein, at 50487 to 51327 9714

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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49,489 + 9713 mRNA_1345 0.71 -0.1
49,497 - 9713 mRNA_1345 0.71 1.1
49,516 + 9713 mRNA_1345 0.72 0.3
49,602 - 9713 mRNA_1345 0.75 -1.1
49,648 - 9713 mRNA_1345 0.77 0.3
49,818 - 9713 mRNA_1345 0.84 -0.4
49,820 + 9713 mRNA_1345 0.84 -0.9
49,921 - 9713 mRNA_1345 0.88 -0.2
49,962 - 9713 mRNA_1345 0.90 0.2
50,203 + -2.1
50,239 + -0.7
50,432 + -1.0
50,481 + -0.2
50,484 - 0.3
50,517 + -0.9
50,688 + 9714 mRNA_1346 0.24 0.6
50,711 + 9714 mRNA_1346 0.27 0.3
50,725 + 9714 mRNA_1346 0.28 1.2
50,821 - 9714 mRNA_1346 0.40 0.2
50,856 + 9714 mRNA_1346 0.44 0.3
51,021 - 9714 mRNA_1346 0.63 0.3
51,118 + 9714 mRNA_1346 0.75 -3.0
51,324 - -1.1
51,363 - -2.3
51,697 - 1.4
51,856 - -1.3
51,871 - -1.3
51,877 + 0.9
51,886 + -0.2
52,002 - 1.4
52,018 + 0.6