Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1338

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1337: 9705 - K17732 PMPCB, MAS1 mitochondrial-processing peptidase subunit beta, at 29044 to 31153 9705 mRNA_1338: 9706 - SUPERFAMILY--SSF52047, at 31623 to 33145 9706 mRNA_1339: 9707 - Hypothetical Protein, at 33554 to 34142 9707

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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31,204 + 0.7
31,259 + 0.0
31,264 - 0.9
31,362 + 1.1
31,634 + -1.0
31,951 - 9706 mRNA_1338 0.22 0.4
32,104 + 9706 mRNA_1338 0.32 -0.8
32,107 - 9706 mRNA_1338 0.32 1.7
32,355 - 9706 mRNA_1338 0.48 -1.9
32,360 - 9706 mRNA_1338 0.48 -0.6
32,401 + 9706 mRNA_1338 0.51 0.8
32,678 + 9706 mRNA_1338 0.69 -0.0
32,848 + 9706 mRNA_1338 0.80 0.4
32,867 - 9706 mRNA_1338 0.82 1.6
32,966 - 9706 mRNA_1338 0.88 1.2
33,122 + 0.9
33,132 - 0.9
33,132 - -0.1
33,135 - 0.3
33,142 + -0.3
33,275 - -0.2
33,279 - -0.0
33,291 + -1.3
33,424 - -0.4
33,429 + 1.3
33,532 - -1.2
33,579 - 0.4
33,583 + -0.6
33,596 - -2.3
33,617 + 9707 mRNA_1339 0.11 0.3
33,627 + 9707 mRNA_1339 0.12 0.7
33,644 - 9707 mRNA_1339 0.15 0.3
33,669 - 9707 mRNA_1339 0.20 -1.3
33,697 + 9707 mRNA_1339 0.24 0.2
33,773 - 9707 mRNA_1339 0.37 1.3
33,780 - 9707 mRNA_1339 0.38 -1.0
34,141 + -1.5