Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1 + 0.7
25 + -0.3
49 - -0.1
50 + 1.7
53 + -1.9
57 - -0.8
57 + 1.1
58 - -0.7
62 + 1.3
62 - -1.2
76 + 1.7
109 + 0.2
122 + -0.1
125 - 2.4
126 + 1.2
128 - -0.0
134 + 0.9
143 + 1.2
144 + 0.3
148 + 1.2
176 - -0.2
186 + -0.5
199 + 1.0
240 + -0.3
240 + 0.0
250 + 0.1
250 + 0.3
256 - -0.9
279 + -1.4
282 + -2.0
286 - -0.4
290 + 0.2
542 - 9694 mRNA_1326 0.21 -2.4
545 + 9694 mRNA_1326 0.22 -0.6
726 - 9694 mRNA_1326 0.34 -3.8
1,007 + 9694 mRNA_1326 0.53 -3.6
1,016 - 9694 mRNA_1326 0.54 -2.8
1,322 - 9694 mRNA_1326 0.74 -2.5
1,417 - 9694 mRNA_1326 0.81 -0.3
1,888 - -0.3
1,889 - -0.3
2,000 + -0.6
2,009 + 1.1
2,141 - -1.3
2,152 - -0.0
2,166 + -0.1
2,167 + -1.2
2,173 + -0.4
2,180 - 1.2
2,180 + -0.2
2,189 + 0.6
2,189 + -0.2
2,197 + -3.6
2,246 + 0.7
2,333 - -3.7
2,471 + -1.2
2,490 + -2.1