Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1237

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1236: 9604 - K02377 TSTA3, fcl GDP-L-fucose synthase, at 722261 to 724161 9604 mRNA_1237: 9605 - SUPERFAMILY--SSF52047, at 724433 to 725551 9605 mRNA_1238: 9606 - SUPERFAMILY--SSF52047, at 726176 to 728961 9606

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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724,220 - -0.1
724,390 - 0.2
724,421 - -0.4
724,700 - 9605 mRNA_1237 0.24 1.9
724,708 + 9605 mRNA_1237 0.25 0.3
724,710 - 9605 mRNA_1237 0.25 -0.9
724,719 + 9605 mRNA_1237 0.26 -0.1
724,797 + 9605 mRNA_1237 0.33 0.1
724,809 + 9605 mRNA_1237 0.34 -2.7
724,816 + 9605 mRNA_1237 0.34 0.0
724,817 - 9605 mRNA_1237 0.34 0.2
725,009 + 9605 mRNA_1237 0.51 0.1
725,143 + 9605 mRNA_1237 0.63 -1.0
725,492 + -0.3
725,698 - -0.2
725,715 + 0.1
725,715 - -1.0
725,750 - 0.5
725,752 - -1.1
725,753 - -0.4
725,771 + 0.3
725,877 + -0.2
726,057 + -0.4
726,077 - 0.1
726,206 - 0.1
726,208 - -0.5
726,218 - -0.2
726,345 - 2.6
726,386 + -0.7
726,406 - -1.9