Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_964

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_963: 9331 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 84124 to 85910 9331 mRNA_964: 9332 - Hypothetical Protein, at 86721 to 89416 9332 mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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85,857 - -3.5
85,974 - -2.2
85,975 + -0.3
85,986 + -0.4
85,991 - -1.1
86,007 + -0.6
86,013 + -0.6
86,013 + 0.7
86,019 + -3.0
86,022 + -1.3
86,073 - 1.7
86,083 - -1.0
86,089 - -0.3
86,090 + -0.1
86,094 + -0.1
86,095 + 0.8
86,097 + 2.3
86,104 - -0.2
86,108 + 0.3
86,119 + 0.6
86,124 - -0.6
86,130 + 0.8
86,132 + 0.7
86,133 + -2.8
86,138 - -1.0
86,140 - 0.6
86,266 + 0.5
86,420 + -1.3
86,477 + 0.8
86,595 + 1.8
86,661 + 1.2
86,881 + 0.6
87,150 + 9332 mRNA_964 0.16 -0.7
87,158 - 9332 mRNA_964 0.16 1.7
87,176 - 9332 mRNA_964 0.17 -0.9
87,348 - 9332 mRNA_964 0.23 0.4
87,650 - 9332 mRNA_964 0.34 1.4
87,910 + 9332 mRNA_964 0.44 0.1
88,019 + 9332 mRNA_964 0.48 0.3
88,039 + 9332 mRNA_964 0.49 -0.3
88,066 - 9332 mRNA_964 0.50 1.7
88,188 + 9332 mRNA_964 0.54 -0.1
88,193 + 9332 mRNA_964 0.55 1.1
88,199 + 9332 mRNA_964 0.55 0.3
88,592 - 9332 mRNA_964 0.69 0.1
88,595 + 9332 mRNA_964 0.70 0.2
88,741 + 9332 mRNA_964 0.75 0.3
88,859 - 9332 mRNA_964 0.79 -0.0
88,882 + 9332 mRNA_964 0.80 -1.2
89,065 - 9332 mRNA_964 0.87 0.9
89,170 + -0.2
89,229 - 1.9
89,508 - 1.0
89,684 + 0.1
89,863 - -0.8
89,949 + -0.0
90,054 - 0.7
90,054 + 1.2
90,189 + -0.9
90,191 - -0.3
90,336 - 9333 mRNA_965 0.19 1.4