Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1 + 1.1
1 + 0.1
1 + 1.4
1 + -0.7
1 + 0.8
2 + -0.1
2 + -1.2
5 + 1.1
18 + 0.5
30 + -0.3
37 + 0.5
37 + 2.3
41 + 0.2
42 + 0.1
44 + -0.1
49 + 0.8
49 + -0.6
50 + 0.6
54 + 0.5
58 - -0.9
60 - -0.4
60 + 0.6
60 - -0.8
61 - 3.5
61 + -1.1
63 + -1.4
63 + -1.7
63 + 1.5
63 + 2.6
63 + 0.5
63 + -1.1
64 + -1.9
66 - -0.3
66 + 0.7
70 + 0.3
70 + -0.9
70 - 0.4
71 + -0.2
73 + 0.4
75 - -2.2
77 - -3.2
78 + 2.6
78 - -2.2
78 + -0.6
78 + -0.1
78 + -0.3
78 + -0.5
78 + 0.3
78 + -0.3
78 + 0.6
79 + -1.4
81 - -0.8
81 - -1.6
82 + -0.9
85 + 0.8
104 + 0.6
126 + -0.5
126 + 1.4
128 - -0.8
135 + 0.8
142 + 1.5
150 + -0.7
154 + 1.1
157 + -0.7
171 - 0.5
171 + -1.1
172 + 1.6
172 + 0.2
175 - -0.9
176 - 0.4
177 - 0.1
177 - 0.2
191 - 1.0
192 + -0.8
192 + -0.9
192 + 0.0
193 + 1.7
193 + -1.1
193 + 1.9
198 - -1.0
218 + 0.6
225 + 1.6
235 + -0.5
242 + 0.3
263 - -0.2
293 + -0.7
303 + 1.2
333 - 1.0
339 - -0.0
348 + 0.2
349 + 0.8
377 - 0.0
381 - 1.3
469 + -1.0
487 - 9298 mRNA_930 0.10 -0.6
722 + 9298 mRNA_930 0.29 -1.1
1,641 - 0.7
1,656 - -1.1
1,768 - -1.5
1,778 - 0.2
1,794 + 2.4