Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_733

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1746932 to 1748724 9100 mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1748767 to 1750473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1750869 to 1753209 9102

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,748,049 - 9100 mRNA_732 0.62 0.2
1,748,114 - 9100 mRNA_732 0.66 -0.3
1,748,120 - 9100 mRNA_732 0.66 -1.0
1,748,126 + 9100 mRNA_732 0.67 -1.3
1,748,328 + 9100 mRNA_732 0.78 -0.2
1,748,383 - 9100 mRNA_732 0.81 -2.3
1,748,385 - 9100 mRNA_732 0.81 -1.2
1,748,407 + 9100 mRNA_732 0.82 -2.0
1,748,481 - 9100 mRNA_732 0.86 -1.6
1,748,494 + 9100 mRNA_732 0.87 0.0
1,748,520 - 9100 mRNA_732 0.89 -0.5
1,748,657 + -2.0
1,748,664 - -1.0
1,748,697 + 0.5
1,748,718 - -0.2
1,748,816 - 0.1
1,748,843 + 2.9
1,748,846 - -0.0
1,748,945 + 9101 mRNA_733 0.10 -0.5
1,749,173 - 9101 mRNA_733 0.24 -1.8
1,749,245 + 9101 mRNA_733 0.28 0.5
1,749,264 - 9101 mRNA_733 0.29 -0.4
1,749,276 - 9101 mRNA_733 0.30 -0.1
1,749,314 - 9101 mRNA_733 0.32 -0.7
1,749,377 + 9101 mRNA_733 0.36 0.6
1,749,389 + 9101 mRNA_733 0.36 0.3
1,749,554 + 9101 mRNA_733 0.46 1.4
1,749,554 + 9101 mRNA_733 0.46 -0.2
1,749,624 + 9101 mRNA_733 0.50 0.1
1,749,678 - 9101 mRNA_733 0.53 0.5
1,749,702 - 9101 mRNA_733 0.55 0.5
1,749,765 + 9101 mRNA_733 0.58 0.3
1,749,833 - 9101 mRNA_733 0.62 -2.2
1,750,110 + 9101 mRNA_733 0.79 0.4
1,750,153 + 9101 mRNA_733 0.81 0.3
1,750,175 - 9101 mRNA_733 0.82 -1.0
1,750,562 - 1.1
1,751,371 + 9102 mRNA_734 0.21 -1.1