Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_662

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_661: 9029 - Hypothetical Protein, at 1593045 to 1593501 9029 mRNA_662: 9030 - HMMPfam-EF-hand domain pair-PF13499,ProSitePatterns-EF-hand calcium-binding domain.-PS00018,ProSiteProfiles-EF-hand calcium-binding domain profile.-PS50222,SUPERFAMILY--SSF47473, at 1593854 to 1595354 9030 mRNA_663: 9031 - SUPERFAMILY--SSF103196, at 1595693 to 1596287 9031

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,593,262 - 9029 mRNA_661 0.47 0.0
1,593,436 - 9029 mRNA_661 0.86 0.1
1,593,556 - -0.9
1,593,847 + 0.8
1,594,010 + 9030 mRNA_662 0.10 0.5
1,594,119 - 9030 mRNA_662 0.18 1.3
1,594,204 - 9030 mRNA_662 0.23 0.6
1,594,569 + 9030 mRNA_662 0.48 1.9
1,594,718 + 9030 mRNA_662 0.58 0.9
1,594,860 - 9030 mRNA_662 0.67 1.3
1,594,885 - 9030 mRNA_662 0.69 -0.4
1,594,895 + 9030 mRNA_662 0.69 -1.2
1,594,957 + 9030 mRNA_662 0.73 -1.4
1,595,135 + 9030 mRNA_662 0.85 -0.1
1,595,174 + 9030 mRNA_662 0.88 1.3
1,595,286 + -0.1
1,595,303 + 0.3
1,595,425 - 0.9
1,595,426 + 0.3
1,595,427 - -0.0
1,595,446 + -1.2
1,595,449 + 2.1
1,595,452 + 2.3
1,595,562 - -0.6
1,595,577 - 0.1
1,595,588 + -0.6
1,595,600 + 0.5
1,595,601 - 0.4
1,595,742 - -1.4