Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_597

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_597: 8965 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 1435317 to 1436977 8965 mRNA_598: 8966 - ProSiteProfiles-F-box domain profile.-PS50181, at 1437888 to 1441324 8966

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,434,639 + -0.3
1,434,768 - -1.2
1,434,961 + -2.2
1,435,058 + -2.5
1,435,231 + -0.3
1,435,246 - -0.4
1,435,370 - 1.4
1,435,514 - 8965 mRNA_597 0.12 2.2
1,435,663 - 8965 mRNA_597 0.21 1.2
1,435,957 - 8965 mRNA_597 0.39 -0.6
1,436,213 - 8965 mRNA_597 0.54 0.6
1,436,632 - 8965 mRNA_597 0.79 0.4
1,436,952 - 3.7
1,436,954 + -0.5
1,437,210 - 0.1
1,437,218 + -0.8
1,437,219 - -0.0
1,437,222 + 1.8
1,437,223 + 0.8
1,437,242 + -0.2
1,437,243 - 1.6
1,437,255 - -0.5
1,437,281 - -1.1
1,437,295 - 0.6
1,437,301 + -0.8
1,437,321 - 0.0
1,437,329 - 0.3
1,437,334 + 0.5
1,437,349 + 0.3
1,437,360 - -0.5
1,437,383 + 0.8
1,437,399 - 0.8
1,437,401 - -2.3
1,437,402 - 0.5
1,437,456 - 1.2
1,437,505 + 0.8
1,437,534 - 0.5
1,437,558 + 0.2
1,437,558 + -2.4
1,437,716 - 0.2
1,437,827 + -1.0
1,437,862 + -1.0