Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_511

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_510: 8878 - K01922 PPCS, coaB phosphopantothenate-cysteine ligase, at 1214489 to 1216016 8878 mRNA_511: 8879 - KOG1426 FOG RCC1 domain, at 1216193 to 1218102 8879 mRNA_512: 8880 - HMMPfam-Glutathione S-transferase, C-terminal domain-PF13410,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833, at 1218210 to 1219403 8880

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,216,143 - 1.2
1,216,552 + 8879 mRNA_511 0.19 -1.7
1,217,441 - 8879 mRNA_511 0.65 0.4
1,217,527 + 8879 mRNA_511 0.70 -0.2
1,218,048 + 0.3
1,218,438 - 8880 mRNA_512 0.19 1.2
1,218,981 - 8880 mRNA_512 0.65 -0.4