Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_454

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_453: 8821 - SUPERFAMILY--SSF52047, at 1055222 to 1056818 8821 mRNA_454: 8822 - Hypothetical Protein, at 1057192 to 1059678 8822 mRNA_455: 8823 - KOG1745 Histones H3 and H4, at 1060190 to 1060901 8823

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,056,525 + 8821 mRNA_453 0.82 0.5
1,056,543 + 8821 mRNA_453 0.83 0.2
1,056,571 + 8821 mRNA_453 0.84 -0.7
1,056,791 - 0.8
1,056,804 - -0.7
1,056,812 + -1.2
1,056,819 - 0.8
1,056,914 - 0.0
1,056,958 + -0.0
1,056,973 - -0.6
1,056,976 + -0.6
1,057,122 + 0.4
1,057,123 + -1.3
1,057,286 - 0.7
1,057,997 - 8822 mRNA_454 0.32 0.1
1,058,034 - 8822 mRNA_454 0.34 -2.1
1,058,034 - 8822 mRNA_454 0.34 -1.0
1,058,104 - 8822 mRNA_454 0.37 -1.0
1,058,121 + 8822 mRNA_454 0.37 -0.2
1,058,211 + 8822 mRNA_454 0.41 -0.5
1,058,361 - 8822 mRNA_454 0.47 0.2
1,058,361 - 8822 mRNA_454 0.47 1.0
1,058,499 + 8822 mRNA_454 0.53 -0.4
1,058,964 + 8822 mRNA_454 0.71 0.6
1,059,149 + 8822 mRNA_454 0.79 0.7
1,059,243 + 8822 mRNA_454 0.82 -0.5
1,059,358 - 8822 mRNA_454 0.87 0.2
1,060,029 - -1.6
1,060,176 - -0.3
1,060,181 - 0.5
1,060,320 + 8823 mRNA_455 0.18 -2.2