Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_425

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_424: 8792 - HMMPfam-Diaphanous GTPase-binding Domain-PF06371,SUPERFAMILY--SSF48371, at 987368 to 990699 8792 mRNA_425: 8793 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 991145 to 992451 8793 mRNA_426: 8794 - Hypothetical Protein, at 992746 to 993344 8794

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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990,163 + 8792 mRNA_424 0.84 -1.2
990,201 + 8792 mRNA_424 0.85 1.9
990,342 - 8792 mRNA_424 0.89 -2.1
990,635 + -2.0
990,768 - 0.3
991,085 - -0.5
991,134 - 0.1
991,212 - 0.0
991,236 + -0.0
991,475 - 8793 mRNA_425 0.25 0.4
991,507 + 8793 mRNA_425 0.28 0.2
992,267 - 8793 mRNA_425 0.86 -0.2
992,391 + -0.2
992,974 - 8794 mRNA_426 0.38 0.5
993,296 + -0.6
993,298 + -1.1