Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_423

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_422: 8790 - KOG0911 Glutaredoxin-related protein, at 984573 to 985710 8790 mRNA_423: 8791 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 985910 to 986810 8791 mRNA_424: 8792 - HMMPfam-Diaphanous GTPase-binding Domain-PF06371,SUPERFAMILY--SSF48371, at 987368 to 990699 8792

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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985,680 + 0.6
985,804 + 0.3
986,081 + 8791 mRNA_423 0.19 -0.8
986,551 - 8791 mRNA_423 0.71 -1.4
986,663 - 8791 mRNA_423 0.84 -2.4
986,698 - 8791 mRNA_423 0.87 0.1
986,935 - -1.4
986,945 - 0.3
986,956 + 0.6
986,964 + -0.7
986,989 - 0.0
987,122 - -1.8
987,132 - -1.1
987,154 + -0.1
987,189 - 1.0
987,290 + -0.2
987,306 - -2.1
987,335 + -0.7
987,381 - 1.0
987,442 + 0.6
987,563 - -2.1
987,717 - 8792 mRNA_424 0.10 -0.3
987,728 - 8792 mRNA_424 0.11 0.7
987,749 - 8792 mRNA_424 0.11 -0.9