Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_397

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921691 to 924142 8764 mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924312 to 925720 8765 mRNA_398: 8766 - KOG1305 Amino acid transporter protein, at 925990 to 928121 8766

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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923,518 - 8764 mRNA_396 0.75 0.4
923,546 - 8764 mRNA_396 0.76 -0.9
923,553 - 8764 mRNA_396 0.76 1.2
924,076 - 1.1
924,126 - -0.7
924,389 - 0.1
924,518 - 8765 mRNA_397 0.15 0.2
924,536 - 8765 mRNA_397 0.16 -0.4
924,542 + 8765 mRNA_397 0.16 -0.7
924,560 + 8765 mRNA_397 0.18 0.2
924,650 + 8765 mRNA_397 0.24 0.3
924,783 - 8765 mRNA_397 0.33 0.5
924,994 + 8765 mRNA_397 0.48 -0.6
925,442 - 8765 mRNA_397 0.80 -1.5
925,578 - 8765 mRNA_397 0.90 1.1
925,853 - -0.6
925,858 - 0.6
925,859 + -1.5
925,875 - -0.6
925,876 - 0.2
925,876 + 0.2
925,883 - 0.2
925,889 + 1.7
925,890 - 0.1
925,995 - 0.7
926,030 - -0.5
926,154 + -1.8
926,167 - 0.6
926,462 + 8766 mRNA_398 0.22 0.2
926,556 + 8766 mRNA_398 0.27 0.5
926,594 + 8766 mRNA_398 0.28 0.8
926,615 - 8766 mRNA_398 0.29 -0.5