Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_389

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_389: 8757 - HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993, at 906859 to 910715 8757 mRNA_390: 8758 - K00869 E2.7.1.36, MVK, mvaK1 mevalonate kinase, at 910981 to 912334 8758

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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905,876 - -0.1
906,751 - 1.0
907,188 + 0.1
907,768 - 8757 mRNA_389 0.24 0.6
908,071 - 8757 mRNA_389 0.31 -0.0
908,441 + 8757 mRNA_389 0.41 0.2
908,697 - 8757 mRNA_389 0.48 0.7
908,949 + 8757 mRNA_389 0.54 0.5
909,008 - 8757 mRNA_389 0.56 0.0
909,839 - 8757 mRNA_389 0.77 -0.0
910,303 + 8757 mRNA_389 0.89 -0.0
910,469 - 0.1
910,474 + -0.8
910,924 - 1.9