Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_385

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_383: 8751 - K02922 RP-L37e, RPL37 large subunit ribosomal protein L37e, at 890896 to 891869 8751 mRNA_384: 8752 - KOG0004 Ubiquitin/40S ribosomal protein S27a fusion, at 892471 to 892767 8752 mRNA_385: 8753 - Hypothetical Protein, at 892828 to 898381 8753 mRNA_386: 8754 - Hypothetical Protein, at 898444 to 900294 8754

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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892,974 + -1.6
892,987 + 0.4
892,994 - -0.1
893,000 - 0.1
893,403 - 8753 mRNA_385 0.10 -0.5
893,711 + 8753 mRNA_385 0.16 0.3
893,730 + 8753 mRNA_385 0.16 0.6
894,133 - 8753 mRNA_385 0.23 1.5
894,149 + 8753 mRNA_385 0.24 -0.7
894,613 + 8753 mRNA_385 0.32 0.1
895,451 - 8753 mRNA_385 0.47 1.1
895,598 + 8753 mRNA_385 0.50 1.6
895,715 - 8753 mRNA_385 0.52 -0.6
896,020 - 8753 mRNA_385 0.57 -4.8
896,496 - 8753 mRNA_385 0.66 0.0
896,766 - 8753 mRNA_385 0.71 -0.0
897,198 - 8753 mRNA_385 0.79 -0.3
897,348 - 8753 mRNA_385 0.81 -0.4
897,640 - 8753 mRNA_385 0.87 0.4
897,652 - 8753 mRNA_385 0.87 0.7
897,659 - 8753 mRNA_385 0.87 1.1
897,664 + 8753 mRNA_385 0.87 0.4
897,790 - 8753 mRNA_385 0.89 0.1
897,791 + 8753 mRNA_385 0.89 0.3
897,792 - 8753 mRNA_385 0.89 -0.8
897,806 - 8753 mRNA_385 0.90 -0.5
897,819 + 8753 mRNA_385 0.90 -0.0
897,830 - -0.0
897,838 + 0.2
897,926 + -1.0
897,933 + 1.1
897,939 - -0.8
898,538 - 0.4
898,540 - 0.5
898,801 - 8754 mRNA_386 0.19 1.4
898,832 + 8754 mRNA_386 0.21 1.5
899,121 - 8754 mRNA_386 0.37 1.2