Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_194

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_194: 8562 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 473851 to 475704 8562 mRNA_195: 8563 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 475882 to 478455 8563

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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472,879 + -0.5
472,892 - 0.1
472,894 + -0.3
473,064 - 0.4
473,084 - 1.0
473,085 - -0.1
473,093 + 0.1
473,102 + 1.6
473,102 - -1.7
473,111 - -1.0
473,115 + -1.1
473,154 - -0.5
473,169 + -0.6
473,169 - -0.2
473,176 + 0.6
473,188 + -0.2
473,188 - -0.6
473,193 + 0.9
473,199 + -1.3
473,210 - 0.8
473,211 + -1.2
473,224 + -2.0
473,228 + 0.1
473,230 - -0.2
473,231 - 0.4
473,239 - -1.3
473,243 + -0.1
473,244 + 1.8
473,247 + -0.8
473,250 + -0.1
473,269 + 0.1
473,280 + 0.1
473,283 - 0.4
473,297 - 0.4
473,302 + -0.2
473,323 - -0.4
473,351 - -0.2
473,358 - 1.4
473,365 - -2.2
473,368 + 1.1
473,393 - -0.6
473,394 + -0.6
473,403 + -0.3
473,406 - 1.2
473,414 + 1.3
473,425 + -0.1
473,466 + 0.5
473,474 - -1.2
473,479 + 1.3
473,482 - 0.5
473,489 - -0.0
473,503 - -2.1
473,509 + -0.4
473,510 - -1.0
473,523 - 0.0
473,545 - 0.2
473,578 - -0.4
473,610 - -0.6
473,611 + -2.0
473,658 + 1.6
473,671 + -0.6
473,695 - 0.8
473,718 - -0.2
473,770 - -0.1
473,790 - -1.1
473,796 - 1.1
473,972 + 0.2
473,981 + -0.6
474,194 + 8562 mRNA_194 0.19 0.4
474,215 - 8562 mRNA_194 0.20 -0.0
474,254 + 8562 mRNA_194 0.22 0.5
474,664 + 8562 mRNA_194 0.44 0.0
474,674 + 8562 mRNA_194 0.44 -0.3
474,961 - 8562 mRNA_194 0.60 0.5
475,410 - 8562 mRNA_194 0.84 0.3
475,696 - 0.4
475,722 - -0.9
475,755 + 0.2