Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_83

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_82: 8450 - KOG0519 Sensory transduction histidine kinase, at 194842 to 197479 8450 mRNA_83: 8451 - Hypothetical Protein, at 197528 to 201315 8451 mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201823 to 202716 8452

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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196,625 - 8450 mRNA_82 0.68 -1.3
196,798 - 8450 mRNA_82 0.74 1.3
196,939 - 8450 mRNA_82 0.79 0.3
196,940 - 8450 mRNA_82 0.80 1.3
196,940 + 8450 mRNA_82 0.80 1.7
196,952 - 8450 mRNA_82 0.80 -0.4
196,987 - 8450 mRNA_82 0.81 -0.4
197,665 - 0.3
198,073 + 8451 mRNA_83 0.14 -0.2
198,124 - 8451 mRNA_83 0.16 -0.9
198,350 + 8451 mRNA_83 0.22 -0.5
198,535 + 8451 mRNA_83 0.27 -0.9
198,549 + 8451 mRNA_83 0.27 -0.5
198,730 + 8451 mRNA_83 0.32 -0.5
198,851 + 8451 mRNA_83 0.35 0.9
199,000 + 8451 mRNA_83 0.39 -0.5
199,141 - 8451 mRNA_83 0.43 -0.9
199,258 - 8451 mRNA_83 0.46 -0.6
199,265 + 8451 mRNA_83 0.46 0.2
199,642 + 8451 mRNA_83 0.56 0.0
200,230 - 8451 mRNA_83 0.71 -2.6
200,480 + 8451 mRNA_83 0.78 -1.1
200,612 + 8451 mRNA_83 0.81 -1.6
200,628 - 8451 mRNA_83 0.82 0.5
200,894 - 8451 mRNA_83 0.89 -0.1
201,076 - 0.2
201,380 - 1.4
201,449 - 0.4
201,487 + 0.6
201,510 - -0.6
201,795 - 1.4
201,796 - 1.9
202,233 + 8452 mRNA_84 0.46 0.2