Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_79

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185623 to 186207 8446 mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186706 to 188932 8447 mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189215 to 191649 8448

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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186,205 - -2.5
186,211 - -0.1
186,215 + -0.5
186,216 - -2.4
186,217 + -0.6
186,248 - -0.4
186,249 - 1.0
186,259 - 0.4
186,289 - -0.3
186,291 + -2.7
186,311 + -0.2
186,338 - -0.5
186,351 + -1.6
186,354 + 1.0
186,354 + 0.2
186,354 + -0.8
186,359 - 0.4
186,385 - 0.3
186,386 - 0.6
186,388 - 2.5
186,392 + -1.1
186,412 + -0.0
186,416 - 0.3
186,422 - 0.2
186,427 + -1.4
186,483 + -1.5
186,511 - 0.2
186,518 + 0.5
186,522 + 0.5
186,526 - 0.7
186,529 - -0.3
186,571 - 0.6
186,574 + 0.1
186,616 - -0.5
186,625 - -0.2
186,638 - 1.2
186,802 - 0.4
186,806 - 0.1
186,927 - -0.4
187,205 - 8447 mRNA_79 0.22 -1.1
187,392 - 8447 mRNA_79 0.31 0.3
188,059 + 8447 mRNA_79 0.61 0.3
188,292 - 8447 mRNA_79 0.71 -1.0
188,304 - 8447 mRNA_79 0.72 0.6
188,379 - 8447 mRNA_79 0.75 0.5
188,544 + 8447 mRNA_79 0.83 0.3
188,707 + 8447 mRNA_79 0.90 0.6
188,895 - 0.0
188,904 + -0.8
188,982 + 0.3
189,583 - 8448 mRNA_80 0.15 0.1