Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_73

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169827 to 173814 8441 mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174089 to 180350 8442

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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168,846 + -0.0
168,861 - 0.3
168,864 - -2.0
168,906 + 0.4
168,935 - -1.5
169,155 - 0.3
169,182 - -1.1
169,202 + -0.8
169,356 + 0.4
169,358 - -0.3
169,648 - -0.5
169,668 - 0.6
169,790 - -0.5
169,840 + -0.4
170,219 + 0.7
170,253 - 8441 mRNA_73 0.11 -0.4
170,901 - 8441 mRNA_73 0.27 0.3
171,079 + 8441 mRNA_73 0.31 1.4
171,383 - 8441 mRNA_73 0.39 0.5
171,551 - 8441 mRNA_73 0.43 -1.1
172,023 - 8441 mRNA_73 0.55 1.0
172,280 - 8441 mRNA_73 0.62 -0.0
172,438 - 8441 mRNA_73 0.65 -0.3
172,739 + 8441 mRNA_73 0.73 1.5
172,751 - 8441 mRNA_73 0.73 0.3
172,813 - 8441 mRNA_73 0.75 -1.6
172,962 + 8441 mRNA_73 0.79 2.6
173,174 - 8441 mRNA_73 0.84 -0.3
173,424 - 1.3
173,424 + -0.2
173,518 - -0.7
173,553 - 1.0
173,837 + 0.8
173,862 + -0.8
174,086 - 0.7
174,096 - -0.0
174,298 + -0.3
174,298 + -1.0
174,532 + 1.2
174,678 + -0.9