Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_66

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433 mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154666 to 156000 8434 mRNA_67: 8435 - K05864 PPID, CYPD peptidyl-prolyl isomerase D, at 156273 to 158120 8435

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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153,880 - 8433 mRNA_65 0.82 -0.3
154,127 + 8433 mRNA_65 0.88 -0.1
154,469 + 1.3
154,529 + -1.7
154,555 + -1.4
154,618 - 0.1
155,507 + 8434 mRNA_66 0.63 -0.4
155,513 - 8434 mRNA_66 0.63 1.1
155,516 + 8434 mRNA_66 0.64 -0.7
155,629 + 8434 mRNA_66 0.72 1.1
155,729 + 8434 mRNA_66 0.80 -0.3
156,004 - 0.5
156,035 + -0.2
156,173 + 0.0
156,304 + -1.2
156,319 + 0.1
156,334 - -1.0
156,617 + 8435 mRNA_67 0.19 0.4