Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_48

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_47: 8415 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 114589 to 115599 8415 mRNA_48: 8416 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 116348 to 117395 8416 mRNA_49: 8417 - K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B, at 117701 to 118562 8417

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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115,372 - 8415 mRNA_47 0.77 -1.1
115,609 - -0.2
115,729 + -1.2
115,808 - 1.0
115,835 + 1.5
115,866 - -0.1
115,920 - -0.8
115,921 + 0.1
115,922 - -0.4
115,931 + -0.8
115,945 + 1.6
115,954 - -0.1
115,969 + 0.9
115,972 + -1.0
115,980 - -1.0
115,988 + 1.2
115,994 + -0.5
115,995 - 0.3
115,998 + -2.0
116,003 + 1.2
116,030 + -0.5
116,037 - -0.5
116,040 + -1.5
116,047 - 1.1
116,052 + 0.4
116,081 + -0.2
116,081 + -1.1
116,154 - -0.4
116,154 + 2.2
116,186 + -0.3
116,192 - 0.2
116,198 + -0.2
116,199 + 0.8
116,231 - -0.2
116,235 + -1.8
116,242 + -1.1
116,270 + 0.3
116,376 - 0.1
116,402 - -0.2
116,467 - 8416 mRNA_48 0.11 0.4
116,564 - 8416 mRNA_48 0.21 -0.5
116,945 + 8416 mRNA_48 0.57 -0.2
117,414 + 1.0
117,652 + 0.9
117,781 - 0.5
117,822 - 8417 mRNA_49 0.14 0.4