Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_29

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_28: 8396 - Hypothetical Protein, at 72914 to 73928 8396 mRNA_29: 8397 - HMMPfam-Swi5-PF07061, at 74095 to 74821 8397 mRNA_30: 8398 - KOG2798 Putative trehalase, at 75069 to 76780 8398

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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73,108 - 8396 mRNA_28 0.19 1.6
73,204 + 8396 mRNA_28 0.29 -0.6
73,217 + 8396 mRNA_28 0.30 1.2
73,300 + 8396 mRNA_28 0.38 -1.1
73,401 - 8396 mRNA_28 0.48 -0.0
73,569 - 8396 mRNA_28 0.65 0.2
73,849 + 0.9
73,998 - 1.1
74,006 - 0.9
74,251 - 8397 mRNA_29 0.21 1.0
74,281 + 8397 mRNA_29 0.26 0.1
74,285 - 8397 mRNA_29 0.26 -0.9
74,296 + 8397 mRNA_29 0.28 -1.0
74,309 + 8397 mRNA_29 0.29 0.1
74,320 - 8397 mRNA_29 0.31 -0.4
74,326 + 8397 mRNA_29 0.32 0.4
74,586 + 8397 mRNA_29 0.68 0.0
74,735 - 8397 mRNA_29 0.88 0.2
74,756 + -0.0
75,229 - 0.2
75,360 - 8398 mRNA_30 0.17 1.6
75,482 - 8398 mRNA_30 0.24 -1.6