Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_18

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_17: 8385 - K00856 E2.7.1.20, ADK adenosine kinase, at 48620 to 50142 8385 mRNA_18: 8386 - KOG1515 Arylacetamide deacetylase, at 50473 to 51921 8386 mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52301 to 54654 8387

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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49,948 + 8385 mRNA_17 0.87 -2.0
50,542 + -0.3
50,663 + 8386 mRNA_18 0.13 -3.0
50,904 - 8386 mRNA_18 0.30 1.7
50,943 + 8386 mRNA_18 0.32 0.5
50,946 - 8386 mRNA_18 0.33 -0.4
51,073 - 8386 mRNA_18 0.41 0.3
51,155 + 8386 mRNA_18 0.47 -0.1
51,432 - 8386 mRNA_18 0.66 -0.2
51,550 + 8386 mRNA_18 0.74 -1.5
51,561 - 8386 mRNA_18 0.75 -1.3
51,562 + 8386 mRNA_18 0.75 1.9
51,654 + 8386 mRNA_18 0.82 -0.4
51,655 - 8386 mRNA_18 0.82 0.7
51,845 - 0.3
51,845 + 1.3
51,846 + -0.8
51,962 - -0.0
52,120 + -0.6
52,128 - 0.5
52,132 - 0.6
52,157 + 0.1
52,815 + 8387 mRNA_19 0.22 1.8
52,819 - 8387 mRNA_19 0.22 0.6
52,852 - 8387 mRNA_19 0.23 0.3
52,876 - 8387 mRNA_19 0.24 -0.6
52,889 - 8387 mRNA_19 0.25 1.7
52,897 + 8387 mRNA_19 0.25 1.6