Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8457

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8457: 16825 - K02728 PSMA4 20S proteasome subunit alpha 3, at 1280934 to 1282715 16825 mRNA_8458: 16826 - Hypothetical Protein, at 1283609 to 1284091 16826

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
1,279,946 + 0.7
1,279,989 - 0.0
1,279,998 - -0.5
1,280,005 + -0.4
1,280,007 + 0.3
1,280,018 + 2.5
1,280,019 + -0.1
1,280,029 - 0.5
1,280,042 + 0.1
1,280,045 - -0.6
1,280,254 - 1.0
1,280,346 + -0.3
1,280,414 - -0.1
1,280,443 - 0.5
1,280,494 + 1.6
1,280,501 + 0.4
1,280,562 + 0.5
1,280,563 - 0.4
1,280,759 - 1.2
1,280,760 + -0.8
1,280,778 + -0.4
1,280,877 - 0.6
1,280,880 + -0.9
1,280,880 + 0.5
1,280,881 + 1.6
1,280,881 + -0.4
1,280,891 + 0.3
1,280,896 + 0.6
1,280,907 - 0.5
1,280,909 + 0.5
1,280,909 + 0.2
1,281,180 + 16825 mRNA_8457 0.14 -1.8
1,281,189 + 16825 mRNA_8457 0.14 -0.2
1,281,330 + 16825 mRNA_8457 0.22 -2.6
1,281,482 - 16825 mRNA_8457 0.31 -0.0
1,282,251 - 16825 mRNA_8457 0.74 -3.6
1,282,522 + 16825 mRNA_8457 0.89 -1.6
1,282,775 + 0.5
1,282,833 + 1.2
1,282,854 - 2.2
1,282,955 - -0.6
1,282,973 - 0.3
1,283,063 + -0.7
1,283,090 - 0.4
1,283,122 + 1.7
1,283,132 + 1.1
1,283,134 + -2.0
1,283,233 + -0.4
1,283,252 - -0.4
1,283,391 - 0.2
1,283,412 + 0.2
1,283,425 + 1.2
1,283,445 - 0.1
1,283,452 - 1.5
1,283,452 - -0.1
1,283,453 + 0.0
1,283,578 + -0.5
1,283,593 - 0.2
1,283,601 - 0.5
1,283,603 - -0.4
1,283,607 + 0.4
1,283,645 - -0.2