Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8453

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8452: 16820 - Hypothetical Protein, at 1269546 to 1270646 16820 mRNA_8453: 16821 - Hypothetical Protein, at 1271447 to 1272536 16821 mRNA_8454: 16822 - Hypothetical Protein, at 1273355 to 1274280 16822

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,270,486 - 16820 mRNA_8452 0.85 -1.0
1,270,573 - 1.3
1,270,681 + -0.8
1,270,718 - 0.9
1,270,828 - -0.7
1,270,930 - 0.5
1,270,968 + 2.5
1,271,041 + -1.6
1,271,070 + 1.1
1,271,118 - -0.7
1,271,135 - 0.6
1,271,138 - -0.0
1,271,148 - 0.0
1,271,157 + 0.3
1,271,174 - -1.2
1,271,306 - 0.6
1,271,339 + -0.3
1,271,522 + -1.4
1,271,565 - 16821 mRNA_8453 0.11 1.2
1,271,865 + 16821 mRNA_8453 0.38 2.0
1,271,986 + 16821 mRNA_8453 0.49 0.1
1,272,037 + 16821 mRNA_8453 0.54 0.2
1,272,129 - 16821 mRNA_8453 0.63 -0.0
1,272,308 + 16821 mRNA_8453 0.79 1.0
1,272,311 - 16821 mRNA_8453 0.79 -0.5
1,272,335 - 16821 mRNA_8453 0.81 -1.4
1,272,439 - -1.9
1,272,461 - 1.5
1,272,577 - -0.5
1,272,629 + -0.1
1,272,726 - -0.8
1,272,768 + -1.1
1,272,908 + 0.4
1,272,995 + 1.6
1,273,070 - 1.6
1,273,129 + 0.8
1,273,167 - 0.6
1,273,175 + 0.4
1,273,176 - 0.1
1,273,180 - -1.8
1,273,189 + 1.3
1,273,217 + -0.2
1,273,219 - -0.3
1,273,302 - 1.2
1,273,302 + -0.3
1,273,337 + -0.2
1,273,412 + -2.2
1,273,448 - 16822 mRNA_8454 0.10 -1.3
1,273,462 - 16822 mRNA_8454 0.12 2.3
1,273,468 + 16822 mRNA_8454 0.12 0.3
1,273,471 + 16822 mRNA_8454 0.13 0.3
1,273,479 - 16822 mRNA_8454 0.13 -0.2