Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8383

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8382: 16750 - K00799 GST, gst glutathione S-transferase, at 1080378 to 1081397 16750 mRNA_8383: 16751 - Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3, at 1081454 to 1084319 16751 mRNA_8384: 16752 - KOG4401 Uncharacterized conserved protein, at 1084970 to 1085744 16752

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,080,486 - 16750 mRNA_8382 0.11 -0.8
1,080,488 + 16750 mRNA_8382 0.11 -0.0
1,080,601 + 16750 mRNA_8382 0.22 1.1
1,080,776 + 16750 mRNA_8382 0.39 0.6
1,080,992 - 16750 mRNA_8382 0.60 -1.1
1,081,047 + 16750 mRNA_8382 0.66 0.7
1,081,171 - 16750 mRNA_8382 0.78 1.4
1,081,272 - 16750 mRNA_8382 0.88 -1.9
1,081,336 + 0.2
1,081,345 + 0.8
1,081,592 - -1.2
1,082,099 + 16751 mRNA_8383 0.23 0.3
1,082,177 - 16751 mRNA_8383 0.25 -0.5
1,082,211 - 16751 mRNA_8383 0.26 1.7
1,082,225 + 16751 mRNA_8383 0.27 0.0
1,082,648 - 16751 mRNA_8383 0.42 -0.0
1,082,671 + 16751 mRNA_8383 0.42 1.2
1,083,107 + 16751 mRNA_8383 0.58 -1.1
1,083,559 + 16751 mRNA_8383 0.73 0.9
1,084,308 + 0.6
1,084,390 + -0.4
1,084,552 + 0.3
1,084,657 + 0.5
1,084,710 - 0.2
1,084,765 - -1.9
1,084,820 - -0.2
1,084,820 - -0.5
1,084,910 - -1.1
1,084,913 + -0.7
1,085,191 - 16752 mRNA_8384 0.29 -0.7
1,085,199 - 16752 mRNA_8384 0.30 0.4
1,085,301 + 16752 mRNA_8384 0.43 -0.3