Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8349

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8348: 16716 - K05349 bglX beta-glucosidase, at 995447 to 998474 16716 mRNA_8349: 16717 - K05349 bglX beta-glucosidase, at 999167 to 1002495 16717

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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998,191 + -2.6
998,323 + -1.2
998,335 - -1.0
998,354 + 0.1
998,422 - 2.6
998,423 - 0.7
998,429 + 0.4
998,443 + -0.1
998,472 + 1.7
998,472 - -1.1
998,481 + 0.9
998,498 - -2.1
998,500 + 0.3
998,515 + 1.7
998,524 - -0.7
998,579 - 0.6
998,594 - -0.9
998,600 - 1.3
998,615 + -0.2
998,630 + 0.6
998,633 - -0.6
998,641 - 0.1
998,643 + -1.1
998,657 - 0.2
998,659 - 1.5
998,663 + 0.3
998,698 - -0.3
998,705 - 1.4
998,724 - -0.2
998,745 - 0.7
998,751 - -0.4
998,754 - 1.1
998,755 - 0.9
998,756 + 0.6
998,763 - -1.3
998,767 - 0.5
998,770 - 1.2
998,771 - 0.8
998,773 + 0.1
998,786 + 0.2
998,786 - -0.8
998,788 - -0.0
998,792 - -0.0
998,797 - 0.4
998,801 - -0.7
998,802 - 0.8
998,804 - -0.7
998,810 + -0.2
998,810 + -1.1
998,814 + 0.1
998,817 + 0.0
998,830 - 0.3
998,842 - 0.7
998,845 + 0.2
998,861 + -0.7
998,867 + 0.1
998,880 - 0.9
998,881 + -1.3
998,935 - 0.2
998,940 - 2.2
998,940 - 1.7
998,940 + 0.2
998,968 - -0.7
998,995 + -0.1
999,009 - 0.9
999,038 - -0.3
999,041 - 2.1
999,049 + 0.9
999,061 + -0.1
999,074 + -0.5
999,078 + 1.6
999,090 - 1.6
999,109 + -0.3
999,127 + -0.4
999,518 + 16717 mRNA_8349 0.11 0.5
999,545 + 16717 mRNA_8349 0.11 0.3
999,697 + 16717 mRNA_8349 0.16 2.0
999,928 + 16717 mRNA_8349 0.23 -0.2
1,000,015 - 16717 mRNA_8349 0.25 -0.4
1,000,123 + 16717 mRNA_8349 0.29 -0.3
1,000,550 - 16717 mRNA_8349 0.42 1.0
1,000,558 - 16717 mRNA_8349 0.42 1.4
1,000,569 + 16717 mRNA_8349 0.42 1.1
1,000,578 + 16717 mRNA_8349 0.42 1.1
1,000,868 + 16717 mRNA_8349 0.51 0.4
1,000,928 + 16717 mRNA_8349 0.53 0.4
1,001,010 - 16717 mRNA_8349 0.55 -0.2
1,001,019 + 16717 mRNA_8349 0.56 0.0
1,001,146 + 16717 mRNA_8349 0.59 0.2
1,001,175 + 16717 mRNA_8349 0.60 -0.9
1,001,193 + 16717 mRNA_8349 0.61 -0.4
1,001,401 + 16717 mRNA_8349 0.67 -1.6
1,001,571 - 16717 mRNA_8349 0.72 0.4
1,001,605 - 16717 mRNA_8349 0.73 0.4
1,001,616 - 16717 mRNA_8349 0.74 -0.4
1,001,625 + 16717 mRNA_8349 0.74 -0.2
1,001,720 - 16717 mRNA_8349 0.77 -0.3
1,002,437 + 1.0
1,002,486 - 0.7
1,002,493 + 1.8
1,002,585 + 0.2
1,002,634 + 1.9
1,002,648 + 0.4
1,002,746 + 0.7
1,002,878 - -1.2
1,002,921 - -1.5
1,002,935 + 0.2
1,002,935 + 0.0
1,002,950 - -1.5
1,003,027 - 0.3
1,003,040 - 1.2
1,003,053 + -0.6
1,003,064 + -1.8
1,003,083 - 1.1
1,003,086 - -0.2
1,003,187 - 0.6
1,003,213 - -0.8
1,003,226 + -0.5