Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8275

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8274: 16642 - KOG4080 Mitochondrial ribosomal protein L32, at 819510 to 820015 16642 mRNA_8275: 16643 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 820228 to 822470 16643 mRNA_8276: 16644 - K06630 YWHAE 14-3-3 protein epsilon, at 822982 to 824358 16644

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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819,279 - -0.0
819,312 + -0.1
819,317 + 0.4
820,023 - 1.2
820,176 + -0.5
820,579 - 16643 mRNA_8275 0.16 -1.8
820,625 - 16643 mRNA_8275 0.18 -0.7
821,382 + 16643 mRNA_8275 0.51 -0.2
821,618 + 16643 mRNA_8275 0.62 0.1
821,665 - 16643 mRNA_8275 0.64 1.9
821,770 - 16643 mRNA_8275 0.69 0.2
821,911 - 16643 mRNA_8275 0.75 -1.0
821,924 - 16643 mRNA_8275 0.76 -1.2
822,191 - 16643 mRNA_8275 0.88 1.3
822,211 - 16643 mRNA_8275 0.88 -0.3
822,229 - 16643 mRNA_8275 0.89 -0.3
822,234 + 16643 mRNA_8275 0.89 -1.1
822,369 + -0.4
822,374 + -1.2
822,395 - -0.0
822,487 - -0.5
822,525 + -0.0
822,661 + -2.0
822,763 - 1.7
822,776 - 0.9
822,776 - -0.1
822,785 + 0.5
822,791 + 0.5
822,795 + 0.4
822,796 - -0.6
822,800 - 1.5
822,804 - -0.5
822,938 - 0.9
822,940 - 1.4
822,947 + 2.2
822,955 - 1.0
822,955 + 1.9
822,956 - 0.4
822,969 + 0.0
822,969 + 1.0
822,973 + 0.5
823,080 - 1.4
823,083 + 0.6
823,085 - 0.5
823,094 - 1.0
823,096 - 2.2
823,104 + 0.2
823,108 + 1.2
823,110 + 1.2
823,110 + 0.1
823,115 - 1.5
823,116 - 1.3
823,116 - 1.3
823,122 + 16644 mRNA_8276 0.10 1.5
823,137 - 16644 mRNA_8276 0.11 -0.3
823,144 + 16644 mRNA_8276 0.12 0.7
823,233 - 16644 mRNA_8276 0.18 0.9
823,254 + 16644 mRNA_8276 0.20 0.9
823,272 - 16644 mRNA_8276 0.21 1.5
823,275 - 16644 mRNA_8276 0.21 0.9
823,280 + 16644 mRNA_8276 0.22 1.2
823,291 - 16644 mRNA_8276 0.22 2.0
823,307 + 16644 mRNA_8276 0.24 1.8
823,409 - 16644 mRNA_8276 0.31 0.9