Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8248

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8248: 16616 - KOG2945 Predicted RNA-binding protein, at 760832 to 762310 16616 mRNA_8249: 16617 - SUPERFAMILY--SSF52047, at 762768 to 764331 16617

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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759,835 - -0.2
759,861 - 1.3
759,862 + -0.3
759,866 - 0.5
759,874 - 0.4
759,882 + 0.4
759,883 - 0.5
759,887 - 0.5
759,889 - 0.6
759,890 + 0.4
759,899 + 0.4
759,899 + -1.6
759,899 - 2.4
759,907 + -0.1
759,935 - -1.0
760,054 + -0.2
760,055 + 1.9
760,070 + -0.3
760,072 + 0.5
760,179 - 0.4
760,318 - -1.4
760,329 + -0.9
760,357 - 0.8
760,490 + 0.7
760,784 - -0.7
760,798 - -0.6
760,800 + -2.0
760,804 - 1.0
760,808 + -0.6
760,813 - 0.9
760,817 - 1.5
760,937 + 0.2
760,948 - -0.3
761,111 + 16616 mRNA_8248 0.19 -0.6
761,136 + 16616 mRNA_8248 0.21 0.6
761,262 - 16616 mRNA_8248 0.29 0.2
761,414 + 16616 mRNA_8248 0.39 -0.2
761,729 + 16616 mRNA_8248 0.61 -0.3
761,847 + 16616 mRNA_8248 0.69 -0.7
762,562 - 1.5
762,850 + 0.2
762,873 + -1.2
762,994 - 16617 mRNA_8249 0.14 -2.5
763,028 + 16617 mRNA_8249 0.17 -0.4
763,047 - 16617 mRNA_8249 0.18 0.5