Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8215

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683320 to 684168 16582 mRNA_8215: 16583 - ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 684650 to 685960 16583 mRNA_8216: 16584 - K14376 PAP poly(A) polymerase, at 686292 to 689011 16584

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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683,977 + 16582 mRNA_8214 0.77 1.1
684,101 + -2.7
684,114 - 0.4
684,135 - -0.2
684,262 + 0.5
684,297 + 0.2
684,419 + -1.3
684,434 - 0.7
684,715 + 1.1
684,962 + 16583 mRNA_8215 0.24 0.6
685,131 - 16583 mRNA_8215 0.37 0.3
685,264 - 16583 mRNA_8215 0.47 -1.0
685,424 + 16583 mRNA_8215 0.59 0.9
685,711 + 16583 mRNA_8215 0.81 1.1
685,712 - 16583 mRNA_8215 0.81 -0.7
685,712 + 16583 mRNA_8215 0.81 -1.5
685,712 - 16583 mRNA_8215 0.81 -0.2
685,854 - -1.3
685,996 + 2.0
686,002 + 0.2
686,014 + 0.3
686,018 - 0.6
686,039 + 0.7
686,162 - 1.9
686,341 + -0.1
686,757 + 16584 mRNA_8216 0.17 1.2
686,893 + 16584 mRNA_8216 0.22 -0.5