Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8164

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8163: 16531 - HMMPfam-Domain of unknown function (DUF4505)-PF14956, at 563626 to 564400 16531 mRNA_8164: 16532 - Hypothetical Protein, at 564616 to 567626 16532

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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563,979 + 16531 mRNA_8163 0.46 0.2
564,106 - 16531 mRNA_8163 0.62 -1.0
564,110 + 16531 mRNA_8163 0.62 -0.3
564,212 - 16531 mRNA_8163 0.76 0.9
564,222 - 16531 mRNA_8163 0.77 -1.3
564,234 - 16531 mRNA_8163 0.78 -1.0
564,410 + 0.9
564,431 - -0.7
564,435 + 1.0
564,576 - -0.3
564,586 + -0.3
564,688 - 0.1
564,858 + 0.7
564,972 - 16532 mRNA_8164 0.12 0.6
565,035 + 16532 mRNA_8164 0.14 -0.5
565,147 + 16532 mRNA_8164 0.18 1.5
565,150 - 16532 mRNA_8164 0.18 0.6
565,175 + 16532 mRNA_8164 0.19 1.7
565,409 - 16532 mRNA_8164 0.26 -0.7
565,603 + 16532 mRNA_8164 0.33 1.7
565,816 + 16532 mRNA_8164 0.40 0.1
566,976 - 16532 mRNA_8164 0.78 -0.8
566,991 + 16532 mRNA_8164 0.79 0.8
567,036 - 16532 mRNA_8164 0.80 1.6
567,237 - 16532 mRNA_8164 0.87 -0.3
567,261 - 16532 mRNA_8164 0.88 1.6
567,392 + -1.2
567,409 - 1.0
567,750 + -0.6
567,761 + 0.3
567,930 - 0.4
567,980 + 0.9
568,369 + -1.0
568,419 - 0.7
568,583 - 1.7