Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8149

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8148: 16516 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 527058 to 528382 16516 mRNA_8149: 16517 - KOG1198 Zinc-binding oxidoreductase, at 528930 to 530418 16517 mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530579 to 532165 16518

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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528,322 - -1.0
528,327 + 0.9
528,481 + -1.3
528,481 + -0.6
528,490 + 1.3
528,498 - 0.4
528,506 - 0.7
528,513 + -0.3
528,549 + -0.0
528,599 - 0.3
528,618 - 0.8
528,625 + 0.2
528,625 + -0.5
528,646 - 0.4
528,651 + -0.3
528,657 - -0.1
528,663 + -1.1
528,671 + -0.3
528,776 + 0.1
528,777 - 0.2
528,779 + -0.9
528,785 + 0.8
528,788 - 0.8
528,817 - -0.3
528,825 + -0.0
528,827 + 0.7
528,827 + -0.6
528,828 - -2.8
528,832 + 0.2
528,841 + -0.2
528,854 + 0.6
528,854 - 0.2
528,854 - -0.2
528,856 + -0.6
528,857 + -0.1
528,864 - 0.8
528,873 + 1.3
528,897 - -1.8
528,898 - 0.5
529,124 - 16517 mRNA_8149 0.13 2.8
529,137 + 16517 mRNA_8149 0.14 -0.5
530,191 + 16517 mRNA_8149 0.85 0.2
530,259 - 16517 mRNA_8149 0.89 1.9
530,364 + 0.3
530,429 + -0.8
530,791 - 16518 mRNA_8150 0.13 0.7