Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8144

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514530 to 515609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515756 to 518130 16512 mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518265 to 522947 16513

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
515,428 + 16511 mRNA_8143 0.83 0.4
515,524 + 2.1
515,565 + -0.9
515,682 - -0.8
515,750 - -1.1
515,847 - -1.6
515,848 - -0.8
515,985 - -1.2
516,007 + 16512 mRNA_8144 0.11 1.1
516,109 + 16512 mRNA_8144 0.15 -0.5
516,141 + 16512 mRNA_8144 0.16 3.0
516,150 + 16512 mRNA_8144 0.17 1.8
516,300 - 16512 mRNA_8144 0.23 -0.4
516,302 + 16512 mRNA_8144 0.23 -1.8
516,336 + 16512 mRNA_8144 0.24 2.4
516,731 - 16512 mRNA_8144 0.41 0.5
516,741 + 16512 mRNA_8144 0.41 -0.8
516,849 - 16512 mRNA_8144 0.46 -0.5
516,867 - 16512 mRNA_8144 0.47 -0.7
516,971 + 16512 mRNA_8144 0.51 0.1
517,097 + 16512 mRNA_8144 0.56 1.3
517,598 + 16512 mRNA_8144 0.78 -0.1
517,725 - 16512 mRNA_8144 0.83 -0.3
517,895 + -0.0
517,898 - -1.4
517,916 - 1.0
518,049 + 0.9
518,155 + 0.3
518,196 - 2.2