Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8126

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8125: 16493 - Hypothetical Protein, at 478218 to 479543 16493 mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479641 to 482114 16494 mRNA_8127: 16495 - BLAST CigA protein-like protein [Phycomyces blakesleean..., at 482813 to 485416 16495

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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478,774 - 16493 mRNA_8125 0.42 0.5
479,196 + 16493 mRNA_8125 0.74 0.5
479,202 + 16493 mRNA_8125 0.74 -0.9
479,510 + -0.7
479,714 - 3.0
480,244 + 16494 mRNA_8126 0.24 -0.1
480,675 - 16494 mRNA_8126 0.42 -0.2
480,951 - 16494 mRNA_8126 0.53 0.4
481,225 + 16494 mRNA_8126 0.64 -0.9
481,564 - 16494 mRNA_8126 0.78 -0.0
481,678 - 16494 mRNA_8126 0.82 0.1
481,947 - 1.5
482,528 - -0.1