Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8103

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8102: 16470 - Hypothetical Protein, at 420636 to 421256 16470 mRNA_8103: 16471 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 421864 to 423445 16471 mRNA_8104: 16472 - Hypothetical Protein, at 423504 to 424497 16472

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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420,866 - 16470 mRNA_8102 0.37 -0.3
421,191 + 16470 mRNA_8102 0.89 -0.9
421,327 + 1.0
421,593 + 0.3
421,597 - -1.5
421,598 + -0.6
421,607 - 0.2
421,630 + -0.0
421,630 - 0.2
421,762 - -1.3
421,769 - 0.2
421,883 - -1.4
421,886 - -2.3
421,905 - 0.3
422,026 - 16471 mRNA_8103 0.10 -2.1
422,190 - 16471 mRNA_8103 0.21 -1.5
422,524 + 16471 mRNA_8103 0.42 0.0
422,607 - 16471 mRNA_8103 0.47 1.3
422,619 + 16471 mRNA_8103 0.48 -0.3
422,628 - 16471 mRNA_8103 0.48 0.4
422,924 + 16471 mRNA_8103 0.67 0.5
423,069 + 16471 mRNA_8103 0.76 0.6
423,214 - 16471 mRNA_8103 0.85 0.3
423,349 + 0.1
423,384 + 0.6
423,494 - 0.5
423,499 - -0.9
423,502 - 0.1
423,668 - 16472 mRNA_8104 0.16 0.9
423,692 + 16472 mRNA_8104 0.19 0.4
423,856 - 16472 mRNA_8104 0.35 -1.4
423,994 - 16472 mRNA_8104 0.49 -0.7
424,408 + 0.8