Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8099

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8098: 16466 - Hypothetical Protein, at 415217 to 416223 16466 mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416888 to 417757 16467 mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418661 to 419532 16468

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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415,936 - 16466 mRNA_8098 0.71 -0.4
416,125 + -0.1
416,323 - -0.7
416,324 + -0.9
416,337 - 1.6
416,402 + -0.8
416,414 + -1.4
416,426 + -1.0
416,454 - 0.2
416,509 + -0.2
416,511 - -0.1
416,531 - 1.5
416,543 - 0.2
416,562 - 0.3
416,563 - -0.2
416,568 + -0.6
416,576 + 1.6
416,578 - 0.6
416,591 + 0.2
416,700 + -0.5
416,702 - -0.3
416,718 - 0.4
416,862 + -1.1
416,875 - 0.4
417,005 + 16467 mRNA_8099 0.13 0.2
417,293 - 16467 mRNA_8099 0.47 -1.2
417,487 - 16467 mRNA_8099 0.69 0.8
418,229 + 0.9
418,392 - 0.1