Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8091

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8090: 16458 - K12737 SDCCAG10 peptidyl-prolyl cis-trans isomerase SDCCAG10, at 395084 to 397372 16458 mRNA_8091: 16459 - K15463 RIT1 tRNA A64-2'-O-ribosylphosphate transferase, at 397502 to 399447 16459 mRNA_8092: 16460 - K14457 MOGAT2, MGAT2 2-acylglycerol O-acyltransferase 2, at 399883 to 401738 16460

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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397,444 - 0.4
398,040 - 16459 mRNA_8091 0.28 -0.2
398,556 + 16459 mRNA_8091 0.54 -0.4
398,936 + 16459 mRNA_8091 0.74 -0.3
399,361 - 0.9
399,522 + 1.2
399,540 + 0.1
399,546 + 0.1
399,787 - 0.0
399,808 - 0.1
399,815 - -2.1
399,827 + 1.0
399,828 + 0.3
399,828 - -1.7
399,835 - -0.9
399,842 + -0.1
399,949 - 1.4
400,155 - 16460 mRNA_8092 0.15 1.6
400,282 + 16460 mRNA_8092 0.21 -1.2
400,286 + 16460 mRNA_8092 0.22 0.1
400,405 + 16460 mRNA_8092 0.28 -0.5
400,410 - 16460 mRNA_8092 0.28 1.0
400,413 + 16460 mRNA_8092 0.29 1.0