Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8020

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8019: 16387 - Hypothetical Protein, at 222905 to 224449 16387 mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224633 to 227369 16388 mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227452 to 229516 16389

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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223,681 + 16387 mRNA_8019 0.50 1.8
223,949 + 16387 mRNA_8019 0.68 1.6
224,244 - 16387 mRNA_8019 0.87 0.7
224,337 + 2.2
224,411 - -0.3
224,448 - 0.5
224,617 - -1.5
224,949 + 16388 mRNA_8020 0.12 -0.6
225,429 - 16388 mRNA_8020 0.29 -2.6
226,756 - 16388 mRNA_8020 0.78 -2.0
226,785 + 16388 mRNA_8020 0.79 -2.2
226,926 - 16388 mRNA_8020 0.84 -3.0
227,166 + -0.6
227,373 - -1.1
227,374 - -0.2
227,393 - -0.4
227,808 - 16389 mRNA_8021 0.17 1.0
227,818 - 16389 mRNA_8021 0.18 -0.8
227,929 - 16389 mRNA_8021 0.23 0.2
228,336 + 16389 mRNA_8021 0.43 1.0