Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7989

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156478 to 157308 16356 mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694 16357 mRNA_7990: 16358 - Hypothetical Protein, at 159249 to 159873 16358

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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157,027 + 16356 mRNA_7988 0.66 0.8
157,027 + 16356 mRNA_7988 0.66 -1.4
157,302 + 1.0
157,413 - -0.4
157,439 + -1.4
157,441 - -0.8
157,863 + -0.8
158,048 + 16357 mRNA_7989 0.13 -2.4
158,202 - 16357 mRNA_7989 0.34 -0.7
158,204 + 16357 mRNA_7989 0.34 -0.6
158,281 + 16357 mRNA_7989 0.44 2.6
158,327 + 16357 mRNA_7989 0.50 1.0
158,566 + 16357 mRNA_7989 0.83 -0.3
158,628 + 0.2
158,762 + 0.9
158,783 + 0.6
158,864 - 0.1
158,923 + -0.4
158,925 + 0.6
159,209 - -1.2
159,246 - -0.3
159,352 - 16358 mRNA_7990 0.16 1.2
159,364 + 16358 mRNA_7990 0.18 -1.0
159,484 + 16358 mRNA_7990 0.38 0.4