Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7978

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7977: 16345 - K17757 CARKD ATP-dependent NAD(P)H-hydrate dehydratase, at 134234 to 135920 16345 mRNA_7978: 16346 - K13341 PEX7, PTS2R peroxin-7, at 136245 to 137738 16346 mRNA_7979: 16347 - KOG0504 FOG Ankyrin repeat, at 137884 to 138763 16347

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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135,439 + 16345 mRNA_7977 0.71 1.6
135,469 + 16345 mRNA_7977 0.73 -0.1
136,191 + 0.6
136,197 + 1.2
136,354 + -3.1
136,527 - 16346 mRNA_7978 0.19 -2.6
136,792 + 16346 mRNA_7978 0.37 -0.8
137,045 - 16346 mRNA_7978 0.54 -2.7
137,253 + 16346 mRNA_7978 0.67 -1.1
137,370 - 16346 mRNA_7978 0.75 -0.1
137,523 + 16346 mRNA_7978 0.86 -1.9
137,529 + 16346 mRNA_7978 0.86 -1.1
137,817 - 0.2
138,045 + 16347 mRNA_7979 0.18 -1.7