Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7970

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337 mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338 mRNA_7971: 16339 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 116954 to 120210 16339

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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114,530 + 0.6
114,531 + -0.7
114,647 + -0.5
114,651 - -2.4
114,724 - 16337 mRNA_7969 0.11 0.0
114,731 + 16337 mRNA_7969 0.13 0.9
114,760 - 16337 mRNA_7969 0.18 0.3
114,840 - 16337 mRNA_7969 0.31 0.1
114,980 - 16337 mRNA_7969 0.55 -0.1
114,998 - 16337 mRNA_7969 0.58 -0.7
115,000 - 16337 mRNA_7969 0.58 -0.6
115,078 - 16337 mRNA_7969 0.72 -0.4
115,087 - 16337 mRNA_7969 0.73 0.6
115,087 + 16337 mRNA_7969 0.73 0.3
115,090 - 16337 mRNA_7969 0.74 2.3
115,093 - 16337 mRNA_7969 0.74 0.4
115,182 + 16337 mRNA_7969 0.89 0.5
115,234 + 0.4
115,284 - 0.5
115,306 + -1.1
115,309 - -0.5
115,534 + 0.9
115,698 + 16338 mRNA_7970 0.16 -0.8
115,717 - 16338 mRNA_7970 0.18 0.8
115,819 - 16338 mRNA_7970 0.27 1.2
115,839 + 16338 mRNA_7970 0.28 0.4
115,966 - 16338 mRNA_7970 0.39 -3.7
116,048 + 16338 mRNA_7970 0.47 -0.7
116,051 - 16338 mRNA_7970 0.47 0.6
116,114 + 16338 mRNA_7970 0.52 0.8
116,117 + 16338 mRNA_7970 0.53 -0.4
116,135 - 16338 mRNA_7970 0.54 1.3
116,170 + 16338 mRNA_7970 0.57 1.9
116,185 - 16338 mRNA_7970 0.58 -0.7
116,267 + 16338 mRNA_7970 0.66 0.5
116,290 - 16338 mRNA_7970 0.68 -1.0
116,404 + 16338 mRNA_7970 0.78 0.8
116,430 - 16338 mRNA_7970 0.80 0.9
116,431 + 16338 mRNA_7970 0.80 1.2
116,437 - 16338 mRNA_7970 0.80 0.1
116,440 - 16338 mRNA_7970 0.81 0.2
116,488 + 16338 mRNA_7970 0.85 0.9
116,586 - -1.0
116,594 - 3.4
116,736 + 0.1
116,793 + -1.3
116,797 - 1.1
117,105 + 0.7
117,159 + 0.5
117,226 - -0.4
117,229 - -0.9
117,247 - 0.2